Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015841947.1_cds_XP_016508196.1_21245
CDS Infomation

[gene=LOC107825795] [db_xref=GeneID:107825795] [protein=DEAD-box ATP-dependent RNA helicase 38-like] [protein_id=XP_016508196.1] [location=join(45569..45799,45887..46180,46356..46583,47505..47570,49046..49462,49640..49751,51489..51574,53706..53768)] [gbkey=CDS]
Sequence

ATGGCTGACAGCTCAAATACTTCCAGTAGCACCGCCGCAACTACGACGGCTAACCCGCCG
GCAATCAGAAGCTGGGCAGACGAAGCCGACGAGATCGATCAAGCCGAGAAGTCCTCAGCC
GCTAATGAAAACGATAGCGCCGAGCCCCAAATCGGATCTCTACAAATCGATGAGACCAAA
AGAGTCAAAAATTCCACTCTCGATGATCCAGAAGATTCCAGAATAGAAGCCGTTACTTCT
GGCGACACTCTGTACAAATCAGCTAAGAGATTTGAGGATTTGAACTTATCTCCGGAGTTA
TTGAAAGGATTATATGTAGAGATGAAGTTTGAGCGACCTAGTAATATTCAAGAGATTAGT
TTGCCTATGATTCTTACGCCGCCCTACAAGAATCTAATTGCTCAGGCTCATAATGGTTCT
GGTAAAACTACTTGCTTTGTGCTTGGGATGTTGAGTCGGGTTGACCCTAAGCTTGCTGCC
CCTCAAGCTCTCTGTATCTGCCCAACCAGAGAATTAGCAATTCAGAATATGGAGGTTCTG
TTGAAGATGGGGAAGTTCACTGGTATAACATCAGAGTTAGCTATCCCAGCAGATGCAGCC
AATTACATACCAGTTTCAAAGCGGCCCCCGGTTTCAGCACAAGTAGTAATTGGCACACCC
GGAACTATAAATAAGTGGGTGACAGCAAGGAAACTGGGCATGAGTTGCATGAAAATTCTT
GTATTTGATGAAGCGGACCACATGTTGGCTGAGACTGGTTTTCAGGATGATTCCATAAGA
ATAATGAAGGCAATTGTCAAAGCCAGTGCTGACAGCCAGGTGCTTCTGTTTTCTGCAACT
TTTGGGGAAAATGTAAAAGCCTTTGTGACAAAAATTGTTAGAGATCTTTTCGTGAAAGAT
TACAACCAGATGTTTGTGAAGAAAGAAGAACTTTCGCTGGATTCAGTGAAGCAGTATAAA
GTGCAGTGTCCGGATGAACTTTCAAAAGTCATGGTGATTAAAGACAAAATACTTGAACTA
GGACAGAAGGTGGGGCAGACAATTATATTTGTTCGTACAAAAAACGGTGCGAGTATGTTG
CATAAATCATTGGTTGACTATGGATATGAAGTGACAACAATTCAAGGTGCTCTGAAGCAA
GAAGATAGAGACAAAATAATCAAGGAGTTCAAAGAAGGATTGACACAAGTTCTTATATCA
ACTGATCTTCTTGCTCGTGGATTTGACCAATCTCAGGTTAATTTGGTGGTTAATTATGAT
CTCCCGGTGAGACATGAGAGTCCATCAGAGCCAGATCATGAGGTATACTTGCATCGGATT
GGTAGAGCTGGGCGTTTTGGCCGCAAAGGTGCCATATTCAACTTGCTATGCAATGACCGG
GACAGCATGCTAATGTCAAAGATTGAGAATCATTTCAACAGTCAAGTGACGGAGATTGCC
TCATGGAGGAGCGATGAAGATTTTGAGAATGCTCTGAAGAAAGCTGGCTTGCTCTAA

Peptide Sequence

PEP ID

XP_016508196.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Nicotiana tabacum]
Sequence

MADSSNTSSSTAATTTANPPAIRSWADEADEIDQAEKSSAANENDSAEPQIGSLQIDETK
RVKNSTLDDPEDSRIEAVTSGDTLYKSAKRFEDLNLSPELLKGLYVEMKFERPSNIQEIS
LPMILTPPYKNLIAQAHNGSGKTTCFVLGMLSRVDPKLAAPQALCICPTRELAIQNMEVL
LKMGKFTGITSELAIPADAANYIPVSKRPPVSAQVVIGTPGTINKWVTARKLGMSCMKIL
VFDEADHMLAETGFQDDSIRIMKAIVKASADSQVLLFSATFGENVKAFVTKIVRDLFVKD
YNQMFVKKEELSLDSVKQYKVQCPDELSKVMVIKDKILELGQKVGQTIIFVRTKNGASML
HKSLVDYGYEVTTIQGALKQEDRDKIIKEFKEGLTQVLISTDLLARGFDQSQVNLVVNYD
LPVRHESPSEPDHEVYLHRIGRAGRFGRKGAIFNLLCNDRDSMLMSKIENHFNSQVTEIA
SWRSDEDFENALKKAGLL

Transcript Sequence

Gene sequence data has not been registered.